This technique connects your iPhone to your desktop computer as a network folder.
Connecting your iPhone/iPod/iPad to Mac OS X:
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on Mac computer go to Finder application, open the Go menu and select Connect to Server:
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enter your iPhone's IP-address taken from Step 5 of WiFi File Transfer manual (enter it exactly as you see it on GoodReader's WiFi-transfer page, with http:// and :8080 parts) and click Connect:
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the network folder will open:

This is the folder with all files that are stored inside GoodReader on your iPhone/iPod. Use this folder the same way you use a normal Mac folder - drag-and-drop files there, copy, move, rename, delete, create subfolders, etc.
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only when you're completely done with file transfer, press the eject button nearby your iPhone's address at the sidebar of any Finder's window:

Wait until the shared address and the eject button disappear, only then close GoodReader's WiFi-transfer page.
- please do NOT assume that the IP-address is the same as it was when you were connecting the last time - IP-addresses change periodically, check it every time when connecting